Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00343 | Not Available | Positive | 328217 - 328339 | 4614.95 |
| ribosomal protein l27 | HMPREF3040_00344 | Not Available | Negative | 328320 - 328577 | 9125.01 |
| ribosomal protein l21 | HMPREF3040_00345 | Not Available | Negative | 328598 - 328909 | 11565.0 |
| octaprenyl pyrophosphate synthetase | HMPREF3040_00346 | Not Available | Positive | 329168 - 330139 | 35219.1 |
| putative dna-binding protein ner | HMPREF3040_00347 | Not Available | Positive | 330366 - 330644 | 10476.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | HMPREF3040_00348 | Not Available | Negative | 330692 - 331951 | 44820.4 |
| bola-like protein | HMPREF3040_00349 | Not Available | Negative | 332006 - 332275 | 10038.0 |
| hypothetical protein | HMPREF3040_00350 | Not Available | Negative | 332268 - 332435 | 6052.38 |
| hypothetical protein | HMPREF3040_00351 | Not Available | Negative | 332419 - 332712 | 10681.0 |
| toluene tolerance protein ttg2d | HMPREF3040_00352 | Not Available | Negative | 332712 - 333347 | 23949.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





