Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase, secg subunit | HMPREF3040_00333 | Not Available | Negative | 317777 - 318109 | 11365.8 |
| phosphoglucosamine mutase | HMPREF3040_00334 | Not Available | Negative | 318337 - 319674 | 47519.4 |
| dihydropteroate synthase | HMPREF3040_00335 | Not Available | Negative | 319667 - 320515 | 30616.9 |
| cell division protease ftsh | HMPREF3040_00336 | Not Available | Negative | 320605 - 322539 | 70712.3 |
| ribosomal rna large subunit methyltransferase j | HMPREF3040_00337 | Not Available | Negative | 322639 - 323268 | 23336.4 |
| rna-binding protein, yhby family | HMPREF3040_00338 | Not Available | Positive | 323394 - 323687 | 10784.4 |
| transcription elongation factor grea | HMPREF3040_00339 | Not Available | Negative | 323843 - 324319 | 17642.0 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | HMPREF3040_00340 | Not Available | Positive | 324567 - 326000 | 51818.3 |
| obg family gtpase cgta | HMPREF3040_00341 | Not Available | Negative | 326040 - 327212 | 43230.2 |
| putative membrane protein | HMPREF3040_00342 | Not Available | Negative | 327228 - 328193 | 34965.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





