Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative exopolyphosphatase | HMPREF3040_00302 | Not Available | Positive | 284521 - 286014 | 55264.0 |
| atp-dependent dna helicase rep | HMPREF3040_00303 | Not Available | Negative | 286061 - 288082 | 77070.6 |
| peptidyl-prolyl cis-trans isomerase | HMPREF3040_00304 | Not Available | Positive | 288169 - 288450 | 10232.6 |
| ketol-acid reductoisomerase | HMPREF3040_00305 | Not Available | Negative | 288496 - 289971 | 54072.2 |
| hth-type transcriptional activator ilvy | HMPREF3040_00306 | Not Available | Positive | 290037 - 291011 | 36171.0 |
| threonine ammonia-lyase | HMPREF3040_00307 | Not Available | Negative | 291008 - 292552 | 56194.4 |
| dihydroxy-acid dehydratase | HMPREF3040_00308 | Not Available | Negative | 292555 - 294363 | 63961.6 |
| branched-chain-amino-acid transaminase | HMPREF3040_00309 | Not Available | Negative | 294470 - 295399 | 34095.6 |
| putative acetolactate synthase isozyme 2 small subunit | HMPREF3040_00310 | Not Available | Negative | 295419 - 295682 | 9703.74 |
| acetolactate synthase, large subunit | HMPREF3040_00311 | Not Available | Negative | 295679 - 297325 | 59195.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





