Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction modification dna specificity domain protein | HMPREF3040_05565 | Not Available | Negative | 5194529 - 5195923 | 51425.2 |
| n-6 dna methylase | HMPREF3040_05566 | Not Available | Negative | 5195920 - 5197395 | 54977.6 |
| hypothetical protein | HMPREF3040_05567 | Not Available | Negative | 5197398 - 5197525 | 4966.02 |
| helicase protein | HMPREF3040_05568 | Not Available | Negative | 5197726 - 5201238 | 134006.0 |
| mrr restriction system protein | HMPREF3040_05569 | Not Available | Positive | 5201426 - 5202340 | 33565.8 |
| cobw/p47k family protein | HMPREF3040_05570 | Not Available | Negative | 5202386 - 5203342 | 35654.8 |
| hypothetical protein | HMPREF3040_05571 | Not Available | Negative | 5203353 - 5203556 | 7729.24 |
| carbon starvation protein csta | HMPREF3040_05572 | Not Available | Negative | 5203606 - 5205771 | 77905.3 |
| hypothetical protein | HMPREF3040_05573 | Not Available | Negative | 5205924 - 5206070 | 5279.29 |
| 4-hydroxyphenylacetate 3-monooxygenase, reductase component | HMPREF3040_05574 | Not Available | Negative | 5206149 - 5206661 | 18552.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





