Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | HMPREF3040_05535 | Not Available | Positive | 5160891 - 5162075 | 44840.5 |
| mannitol dehydrogenase domain protein | HMPREF3040_05536 | Not Available | Positive | 5162156 - 5163616 | 53583.2 |
| hypothetical protein | HMPREF3040_05538 | Not Available | Negative | 5163638 - 5163832 | 6777.36 |
| fcd domain protein | HMPREF3040_05537 | Not Available | Positive | 5163831 - 5164604 | 29309.9 |
| hypothetical protein | HMPREF3040_05539 | Not Available | Negative | 5164745 - 5165569 | 30376.3 |
| hypothetical protein | HMPREF3040_05540 | Not Available | Positive | 5165909 - 5166052 | 5511.39 |
| anti-adapter protein irad domain protein | HMPREF3040_05541 | Not Available | Positive | 5166389 - 5166640 | 9750.53 |
| lysr substrate binding domain protein | HMPREF3040_05542 | Not Available | Negative | 5166633 - 5167544 | 34712.7 |
| beta-aspartyl peptidase | HMPREF3040_05543 | Not Available | Negative | 5167609 - 5168781 | 41086.3 |
| transporter gate domain protein | HMPREF3040_05544 | Not Available | Negative | 5168794 - 5169255 | 16194.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





