Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_05484 | Not Available | Negative | 5128311 - 5128469 | 6159.51 |
| phage regulatory protein, rha family | HMPREF3040_05485 | Not Available | Positive | 5128589 - 5129443 | 31909.4 |
| dicb protein | HMPREF3040_05486 | Not Available | Positive | 5129454 - 5129642 | 7080.48 |
| hypothetical protein | HMPREF3040_05487 | Not Available | Positive | 5129639 - 5129842 | 7250.87 |
| exodeoxyribonuclease 8 domain protein | HMPREF3040_05488 | Not Available | Positive | 5129920 - 5131128 | 45039.2 |
| hypothetical protein | HMPREF3040_05489 | Not Available | Positive | 5131157 - 5131849 | 25161.2 |
| hypothetical protein | HMPREF3040_05490 | Not Available | Negative | 5131850 - 5132091 | 9418.81 |
| tram protein | HMPREF3040_05491 | Not Available | Positive | 5132422 - 5132805 | 14421.1 |
| hypothetical protein | HMPREF3040_05493 | Not Available | Negative | 5133821 - 5133975 | 5881.12 |
| hypothetical protein | HMPREF3040_05494 | Not Available | Positive | 5134124 - 5134342 | 7758.38 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





