Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 266174 - 266249 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 266308 - 266384 | Not Available |
| putative proline-specific permease proy | HMPREF3040_00284 | Not Available | Negative | 266487 - 267872 | 50423.1 |
| glycosyltransferase, wecb/taga/cpsf family | HMPREF3040_00285 | Not Available | Negative | 268063 - 268803 | 27963.8 |
| eca biosynthesis protein wzye | HMPREF3040_00286 | Not Available | Negative | 268806 - 270158 | 51520.2 |
| tdp-fuc4nac:lipid ii fuc4nac transferase | HMPREF3040_00287 | Not Available | Negative | 270155 - 271234 | 40572.9 |
| polysaccharide biosynthesis protein | HMPREF3040_00288 | Not Available | Negative | 271231 - 272481 | 44996.3 |
| dtdp-4-amino-4,6-dideoxy-d-glucose transaminase | HMPREF3040_00289 | Not Available | Negative | 272483 - 273613 | 41922.4 |
| tdp-d-fucosamine acetyltransferase | HMPREF3040_00290 | Not Available | Negative | 273618 - 274292 | 24177.6 |
| glucose-1-phosphate thymidylyltransferase | HMPREF3040_00291 | Not Available | Negative | 274270 - 275151 | 32735.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





