Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_05474 | Not Available | Negative | 5123095 - 5123361 | 9906.93 |
| hypothetical protein | HMPREF3040_05475 | Not Available | Negative | 5123388 - 5123795 | 15581.8 |
| hypothetical protein | HMPREF3040_05476 | Not Available | Negative | 5123796 - 5124566 | 28214.6 |
| hypothetical protein | HMPREF3040_05477 | Not Available | Negative | 5124600 - 5125061 | 17945.5 |
| hypothetical protein | HMPREF3040_05478 | Not Available | Negative | 5125054 - 5126094 | 38367.1 |
| hypothetical protein | HMPREF3040_05479 | Not Available | Negative | 5126066 - 5126617 | 21253.5 |
| putative repressor protein of division inhibition protein dicb | HMPREF3040_05480 | Not Available | Negative | 5126601 - 5126828 | 8246.92 |
| transcriptional repressor dica | HMPREF3040_05481 | Not Available | Positive | 5126905 - 5127312 | 15506.7 |
| hypothetical protein | HMPREF3040_05482 | Not Available | Positive | 5127520 - 5127672 | 5632.51 |
| hypothetical protein | HMPREF3040_05483 | Not Available | Positive | 5127672 - 5128058 | 14580.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





