Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glutamate decarboxylase | HMPREF3040_05464 | Not Available | Negative | 5118387 - 5118910 | 19578.3 |
| hypothetical protein | HMPREF3040_05465 | Not Available | Negative | 5118911 - 5119302 | 14364.9 |
| conjugative relaxase domain protein | HMPREF3040_05466 | Not Available | Negative | 5119305 - 5119642 | 12363.5 |
| hypothetical protein | HMPREF3040_05467 | Not Available | Positive | 5119999 - 5120175 | 6612.26 |
| hypothetical protein | HMPREF3040_05468 | Not Available | Negative | 5120150 - 5120329 | 7017.05 |
| hypothetical protein | HMPREF3040_05469 | Not Available | Negative | 5120450 - 5121436 | 36281.3 |
| hnh endonuclease domain protein | HMPREF3040_05470 | Not Available | Negative | 5121433 - 5121798 | 13870.8 |
| hypothetical protein | HMPREF3040_05471 | Not Available | Negative | 5121800 - 5122207 | 14921.1 |
| hypothetical protein | HMPREF3040_05472 | Not Available | Negative | 5122303 - 5122659 | 14055.8 |
| hypothetical protein | HMPREF3040_05473 | Not Available | Negative | 5122637 - 5123098 | 17615.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





