Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-basal body complex protein flie | HMPREF3040_05454 | Not Available | Negative | 5110214 - 5110555 | 12130.5 |
| sigma-54 interaction domain protein | HMPREF3040_05455 | Not Available | Negative | 5110570 - 5111550 | 36026.8 |
| hypothetical protein | HMPREF3040_05456 | Not Available | Positive | 5111681 - 5111812 | 4834.15 |
| surface presentation of antigens protein | HMPREF3040_05457 | Not Available | Positive | 5111938 - 5112789 | 31652.4 |
| putative flagellar motor switch protein flin | HMPREF3040_05458 | Not Available | Positive | 5112782 - 5113153 | 13528.3 |
| flagellar biosynthetic protein flip | HMPREF3040_05459 | Not Available | Positive | 5113150 - 5113902 | 27130.8 |
| bacterial export protein, family 3 | HMPREF3040_05460 | Not Available | Positive | 5113905 - 5114177 | 9684.52 |
| flagellar biosynthetic protein flir | HMPREF3040_05461 | Not Available | Positive | 5114179 - 5114961 | 28749.4 |
| flagellar biosynthesis protein flhb | HMPREF3040_05462 | Not Available | Positive | 5114951 - 5116090 | 42706.5 |
| flagellar biosynthesis protein flha | HMPREF3040_05463 | Not Available | Positive | 5116074 - 5118167 | 75634.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





