Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-his dipeptidase | HMPREF3040_05404 | Not Available | Positive | 5072931 - 5074388 | 52920.4 |
| hypothetical protein | HMPREF3040_05405 | Not Available | Positive | 5074397 - 5074678 | 10846.0 |
| hypothetical protein | HMPREF3040_05406 | Not Available | Negative | 5074695 - 5075258 | 21353.8 |
| putative peptide chain release factor h | HMPREF3040_05407 | Not Available | Negative | 5075266 - 5075880 | 22926.2 |
| release factor h-coupled rctb family protein | HMPREF3040_05408 | Not Available | Negative | 5075877 - 5077028 | 41975.3 |
| hypothetical protein | HMPREF3040_05409 | Not Available | Negative | 5077029 - 5077172 | 5551.64 |
| acetyltransferase, gnat family | HMPREF3040_05410 | Not Available | Negative | 5077207 - 5077659 | 17437.9 |
| hypothetical protein | HMPREF3040_05411 | Not Available | Negative | 5077669 - 5077848 | 7004.52 |
| hypothetical protein | HMPREF3040_05412 | Not Available | Negative | 5077870 - 5078067 | 7610.22 |
| prevent-host-death family protein | HMPREF3040_05413 | Not Available | Negative | 5078070 - 5078363 | 11234.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





