Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_05384 | Not Available | Positive | 5054104 - 5054244 | 5521.18 |
| hypothetical protein | HMPREF3040_05385 | Not Available | Positive | 5054420 - 5055589 | 44727.0 |
| adhesin biosynthesis transcription regulatory protein | HMPREF3040_05386 | Not Available | Negative | 5056436 - 5056708 | 10553.7 |
| 2fe-2s iron-sulfur cluster-binding domain protein | HMPREF3040_05387 | Not Available | Positive | 5057264 - 5057787 | 18406.0 |
| fad binding domain in molybdopterin dehydrogenase | HMPREF3040_05388 | Not Available | Positive | 5057784 - 5058740 | 33828.8 |
| aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein | HMPREF3040_05389 | Not Available | Positive | 5058737 - 5060935 | 78057.8 |
| putative xanthine dehydrogenase accessory factor | HMPREF3040_05390 | Not Available | Positive | 5060945 - 5061901 | 34719.6 |
| hypothetical protein | HMPREF3040_05391 | Not Available | Positive | 5061880 - 5062029 | 5378.66 |
| putative purine ribonucleoside efflux pump nepi | HMPREF3040_05392 | Not Available | Negative | 5062082 - 5063209 | 39363.8 |
| hypothetical protein | HMPREF3040_05393 | Not Available | Negative | 5063351 - 5064499 | 41958.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





