Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00271 | Not Available | Positive | 257679 - 257885 | 7971.76 |
| hydroxymethylbilane synthase | HMPREF3040_00272 | Not Available | Positive | 258017 - 258979 | 34632.0 |
| uroporphyrinogen-iii synthase | HMPREF3040_00273 | Not Available | Positive | 258976 - 259716 | 27882.6 |
| putative uroporphyrinogen iii methylase | HMPREF3040_00274 | Not Available | Positive | 259738 - 260931 | 43318.7 |
| hemy protein | HMPREF3040_00275 | Not Available | Positive | 260934 - 262130 | 45246.8 |
| hypothetical protein | HMPREF3040_00277 | Not Available | Negative | 262590 - 262712 | 4910.4 |
| arylsulfatase | HMPREF3040_00278 | Not Available | Positive | 262809 - 264464 | 60720.0 |
| anaerobic sulfatase maturase | HMPREF3040_00279 | Not Available | Negative | 264566 - 265831 | 47540.9 |
| Trna-pro | Not Available | Not Available | Positive | 265948 - 266024 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 266067 - 266153 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





