Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_05374 | Not Available | Negative | 5049607 - 5049750 | 4941.77 |
| hypothetical protein | HMPREF3040_05376 | Not Available | Negative | 5049751 - 5049981 | 8158.69 |
| hypothetical protein | HMPREF3040_05375 | Not Available | Positive | 5049968 - 5050609 | 23788.2 |
| hypothetical protein | HMPREF3040_05377 | Not Available | Positive | 5050666 - 5050872 | 8210.83 |
| hypothetical protein | HMPREF3040_05378 | Not Available | Positive | 5050986 - 5051474 | 18477.1 |
| hypothetical protein | HMPREF3040_05379 | Not Available | Positive | 5051621 - 5051791 | 6446.0 |
| repfib replication protein a | HMPREF3040_05380 | Not Available | Positive | 5051784 - 5052761 | 37331.1 |
| site-specific recombinase, phage integrase family | HMPREF3040_05381 | Not Available | Negative | 5053004 - 5053744 | 28164.5 |
| hypothetical protein | HMPREF3040_05382 | Not Available | Negative | 5053755 - 5053883 | 4557.64 |
| hypothetical protein | HMPREF3040_05383 | Not Available | Negative | 5053865 - 5054053 | 7112.43 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





