Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, nad-binding domain protein | HMPREF3040_05314 | Not Available | Positive | 4990462 - 4991517 | 38832.2 |
| adenosine deaminase | HMPREF3040_05315 | Not Available | Negative | 4991553 - 4992245 | 24758.6 |
| hypothetical protein | HMPREF3040_05316 | Not Available | Positive | 4992276 - 4992533 | 9156.26 |
| maltose regulon modulator maly | HMPREF3040_05317 | Not Available | Negative | 4992658 - 4993830 | 43639.2 |
| pts system maltose and glucose-specific iibc component | HMPREF3040_05318 | Not Available | Negative | 4993840 - 4995432 | 56593.4 |
| maltose regulon regulatory protein mali | HMPREF3040_05319 | Not Available | Positive | 4995607 - 4996635 | 36614.9 |
| 7-alpha-hydroxysteroid dehydrogenase | HMPREF3040_05320 | Not Available | Positive | 4996747 - 4997514 | 26766.1 |
| transcriptional regulator, tetr family | HMPREF3040_05321 | Not Available | Positive | 4997735 - 4998325 | 21800.5 |
| glycosyl hydrolase family 2, tim barrel domain protein | HMPREF3040_05322 | Not Available | Positive | 4998716 - 5000527 | 68505.8 |
| transporter, major facilitator family protein | HMPREF3040_05323 | Not Available | Positive | 5000524 - 5001897 | 49968.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





