Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | HMPREF3040_05304 | Not Available | Negative | 4982681 - 4983316 | 23592.7 |
| electron transport complex, rnfabcdge type, e subunit | HMPREF3040_05305 | Not Available | Negative | 4983316 - 4984011 | 24460.5 |
| electron transport complex protein rnfg | HMPREF3040_05306 | Not Available | Negative | 4984015 - 4984635 | 21929.1 |
| electron transport complex protein rnfd | HMPREF3040_05307 | Not Available | Negative | 4984639 - 4985697 | 38158.4 |
| hypothetical protein | HMPREF3040_05308 | Not Available | Negative | 4985698 - 4985994 | 10671.5 |
| electron transport complex, rnfabcdge type, c subunit | HMPREF3040_05309 | Not Available | Negative | 4985995 - 4987866 | 67730.3 |
| electron transport complex, rnfabcdge type, b subunit | HMPREF3040_05310 | Not Available | Negative | 4987859 - 4988437 | 20592.9 |
| electron transport complex protein rnfa | HMPREF3040_05311 | Not Available | Negative | 4988437 - 4989018 | 20898.8 |
| hypothetical protein | HMPREF3040_05312 | Not Available | Negative | 4989095 - 4989535 | 16409.6 |
| oric-binding nucleoid-associated protein | HMPREF3040_05313 | Not Available | Negative | 4989621 - 4989836 | 8417.05 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





