Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator slya | HMPREF3040_05294 | Not Available | Positive | 4974009 - 4974449 | 16622.4 |
| outer membrane lipoprotein pcp | HMPREF3040_05295 | Not Available | Negative | 4974496 - 4974963 | 15602.7 |
| anhydro-n-acetylmuramic acid kinase | HMPREF3040_05296 | Not Available | Positive | 4975237 - 4976346 | 39526.7 |
| putative protein ydha | HMPREF3040_05297 | Not Available | Positive | 4976444 - 4976773 | 12572.2 |
| pyridoxamine 5'-phosphate oxidase | HMPREF3040_05298 | Not Available | Positive | 4976832 - 4977488 | 25546.6 |
| tyrosine--trna ligase | HMPREF3040_05299 | Not Available | Positive | 4977605 - 4978891 | 48016.2 |
| pyridoxal kinase | HMPREF3040_05300 | Not Available | Positive | 4978950 - 4979813 | 31350.1 |
| glutathione s-transferase | HMPREF3040_05301 | Not Available | Negative | 4979857 - 4980462 | 22855.6 |
| putative tripeptide transporter permease | HMPREF3040_05302 | Not Available | Negative | 4980568 - 4982070 | 53994.4 |
| hypothetical protein | HMPREF3040_05303 | Not Available | Negative | 4982353 - 4982553 | 7922.84 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





