Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00261 | Not Available | Positive | 248171 - 248611 | 15832.9 |
| dna helicase ii | HMPREF3040_00262 | Not Available | Negative | 248656 - 250818 | 82048.8 |
| had hydrolase, family ia, variant 1 | HMPREF3040_00263 | Not Available | Negative | 250902 - 251618 | 27123.4 |
| tyrosine recombinase xerc | HMPREF3040_00264 | Not Available | Negative | 251618 - 252514 | 33869.7 |
| hypothetical protein | HMPREF3040_00265 | Not Available | Negative | 252511 - 253218 | 26742.5 |
| diaminopimelate epimerase | HMPREF3040_00266 | Not Available | Negative | 253215 - 254042 | 30341.6 |
| hypothetical protein | HMPREF3040_00267 | Not Available | Negative | 254076 - 254279 | 7177.59 |
| hypothetical protein | HMPREF3040_00268 | Not Available | Positive | 254438 - 254647 | 8236.27 |
| iron donor protein cyay | HMPREF3040_00269 | Not Available | Positive | 254745 - 255065 | 12232.0 |
| adenylate cyclase, class i | HMPREF3040_00270 | Not Available | Negative | 255105 - 257651 | 97735.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





