Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein sufd | HMPREF3040_05254 | Not Available | Positive | 4933048 - 4934319 | 46816.5 |
| cysteine desulfurase/selenocysteine lyase | HMPREF3040_05255 | Not Available | Positive | 4934316 - 4935536 | 44454.4 |
| fe-s metabolism associated domain protein | HMPREF3040_05256 | Not Available | Positive | 4935549 - 4935965 | 15790.3 |
| putative protein erfk/srfk | HMPREF3040_05257 | Not Available | Positive | 4936114 - 4937118 | 36042.4 |
| murein-lipoprotein | HMPREF3040_05258 | Not Available | Negative | 4937182 - 4937418 | 8323.95 |
| pyruvate kinase | HMPREF3040_05259 | Not Available | Negative | 4937729 - 4939357 | 58705.3 |
| hypothetical protein | HMPREF3040_05260 | Not Available | Positive | 4939698 - 4939907 | 7907.85 |
| 4fe-4s binding domain protein | HMPREF3040_05261 | Not Available | Positive | 4940363 - 4940989 | 22417.2 |
| aldehyde ferredoxin oxidoreductase, tungsten cofactor-binding domain protein | HMPREF3040_05262 | Not Available | Positive | 4940926 - 4943112 | 81301.1 |
| hypothetical protein | HMPREF3040_05263 | Not Available | Positive | 4943116 - 4943763 | 24399.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





