Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, major facilitator family protein | HMPREF3040_05242 | Not Available | Negative | 4921062 - 4922327 | 46008.9 |
| transporter, major facilitator family protein | HMPREF3040_05243 | Not Available | Negative | 4922554 - 4923768 | 44655.8 |
| hypothetical protein | HMPREF3040_05244 | Not Available | Negative | 4923867 - 4924223 | 13961.6 |
| hypothetical protein | HMPREF3040_05246 | Not Available | Negative | 4924652 - 4925764 | 39829.7 |
| fad linked oxidase protein | HMPREF3040_05247 | Not Available | Positive | 4926153 - 4929209 | 113118.0 |
| hypothetical protein | HMPREF3040_05248 | Not Available | Positive | 4929206 - 4929616 | 14912.2 |
| hypothetical protein | HMPREF3040_05249 | Not Available | Positive | 4929635 - 4929904 | 10480.6 |
| fes assembly scaffold sufa | HMPREF3040_05251 | Not Available | Positive | 4930453 - 4930821 | 13286.8 |
| fes assembly protein sufb | HMPREF3040_05252 | Not Available | Positive | 4930830 - 4932317 | 54761.1 |
| fes assembly atpase sufc | HMPREF3040_05253 | Not Available | Positive | 4932327 - 4933073 | 27573.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





