Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HMPREF3040_05222 | Not Available | Positive | 4901279 - 4902028 | 27113.0 |
| nlpc/p60 family protein | HMPREF3040_05223 | Not Available | Positive | 4902106 - 4902570 | 17318.7 |
| cyclic di-gmp regulator cdgr | HMPREF3040_05224 | Not Available | Positive | 4902817 - 4903530 | 27126.8 |
| hypothetical protein | HMPREF3040_05225 | Not Available | Positive | 4903593 - 4905029 | 54621.4 |
| hypothetical protein | HMPREF3040_05226 | Not Available | Negative | 4905033 - 4905224 | 7131.61 |
| 3-deoxy-7-phosphoheptulonate synthase | HMPREF3040_05227 | Not Available | Negative | 4905356 - 4906402 | 38707.3 |
| hypothetical protein | HMPREF3040_05228 | Not Available | Negative | 4906559 - 4907392 | 31213.7 |
| hypothetical protein | HMPREF3040_05229 | Not Available | Positive | 4907504 - 4907671 | 6459.06 |
| pyruvate, water dikinase | HMPREF3040_05230 | Not Available | Positive | 4907725 - 4910103 | 87440.1 |
| shortcoa ligase | HMPREF3040_05231 | Not Available | Negative | 4910160 - 4911806 | 60709.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





