Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, dicarboxylate/amino acid:cation na+/h+ symporter family protein | HMPREF3040_05202 | Not Available | Negative | 4882664 - 4884055 | 48731.8 |
| putative membrane-bound metal-dependent hydrolase | HMPREF3040_05203 | Not Available | Negative | 4884188 - 4884778 | 22381.7 |
| had hydrolase, family ia, variant 3 | HMPREF3040_05204 | Not Available | Negative | 4884941 - 4885609 | 24330.7 |
| hypothetical protein | HMPREF3040_05205 | Not Available | Positive | 4885756 - 4886292 | 20368.3 |
| fructosamine kinase | HMPREF3040_05206 | Not Available | Negative | 4886333 - 4887193 | 32479.4 |
| hypothetical protein | HMPREF3040_05207 | Not Available | Negative | 4887299 - 4887589 | 10851.6 |
| hexose kinase, 1-phosphofructokinase family | HMPREF3040_05208 | Not Available | Negative | 4887690 - 4888622 | 32580.1 |
| hypothetical protein | HMPREF3040_05209 | Not Available | Positive | 4888906 - 4889664 | 27599.6 |
| hypothetical protein | HMPREF3040_05210 | Not Available | Negative | 4889717 - 4889839 | 4648.05 |
| shet2 enterotoxin, region | HMPREF3040_05211 | Not Available | Negative | 4889991 - 4891838 | 68789.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





