Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smpa / omla family protein | HMPREF3040_05192 | Not Available | Positive | 4872944 - 4873282 | 12021.3 |
| n,n'-diacetylchitobiose-specific phosphotransferase enzyme iib component | HMPREF3040_05193 | Not Available | Positive | 4873581 - 4873901 | 11427.2 |
| pts system, cellobiose-specific iic component | HMPREF3040_05194 | Not Available | Positive | 4873986 - 4875344 | 48335.1 |
| n,n'-diacetylchitobiose-specific phosphotransferase enzyme iia component | HMPREF3040_05195 | Not Available | Positive | 4875395 - 4875745 | 12730.5 |
| hth-type transcriptional regulator chbr | HMPREF3040_05196 | Not Available | Positive | 4875753 - 4876595 | 32999.4 |
| 6-phospho-beta-glucosidase | HMPREF3040_05197 | Not Available | Positive | 4876700 - 4878052 | 50426.3 |
| ydjc-like protein | HMPREF3040_05198 | Not Available | Positive | 4878065 - 4878814 | 27866.4 |
| catalase | HMPREF3040_05199 | Not Available | Negative | 4878861 - 4881122 | 84232.2 |
| cell division activator ceda | HMPREF3040_05200 | Not Available | Positive | 4881305 - 4881568 | 10201.5 |
| hypothetical protein | HMPREF3040_05201 | Not Available | Positive | 4881845 - 4882660 | 30740.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





