Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_05182 | Not Available | Negative | 4862785 - 4862955 | 6073.28 |
| succinylornithine transaminase | HMPREF3040_05183 | Not Available | Positive | 4863218 - 4864438 | 43532.6 |
| arginine n-succinyltransferase | HMPREF3040_05184 | Not Available | Positive | 4864435 - 4865469 | 38472.0 |
| succinylglutamate-semialdehyde dehydrogenase | HMPREF3040_05185 | Not Available | Positive | 4865466 - 4866944 | 52905.3 |
| succinylarginine dihydrolase | HMPREF3040_05186 | Not Available | Positive | 4866941 - 4868284 | 49313.4 |
| succinylglutamate desuccinylase | HMPREF3040_05187 | Not Available | Positive | 4868277 - 4869245 | 35758.3 |
| spheroplast protein y | HMPREF3040_05188 | Not Available | Positive | 4869575 - 4870060 | 18172.1 |
| hypothetical protein | HMPREF3040_05189 | Not Available | Positive | 4870200 - 4870838 | 23802.6 |
| endonuclease cho | HMPREF3040_05190 | Not Available | Negative | 4870798 - 4871547 | 28348.4 |
| nad+ synthase | HMPREF3040_05191 | Not Available | Negative | 4871915 - 4872742 | 30654.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





