Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | HMPREF3040_05142 | Not Available | Positive | 4820835 - 4821656 | 30599.4 |
| hypothetical protein | HMPREF3040_05143 | Not Available | Negative | 4821613 - 4822059 | 15256.6 |
| hypothetical protein | HMPREF3040_05144 | Not Available | Negative | 4822052 - 4822186 | 5265.42 |
| ybak/proline--trna ligase associated domain protein | HMPREF3040_05145 | Not Available | Negative | 4822334 - 4822837 | 17851.7 |
| diguanylate cyclase domain protein | HMPREF3040_05146 | Not Available | Negative | 4822880 - 4824370 | 56663.8 |
| diguanylate cyclase domain protein | HMPREF3040_05147 | Not Available | Negative | 4824551 - 4825894 | 51055.4 |
| hypothetical protein | HMPREF3040_05148 | Not Available | Negative | 4826173 - 4827456 | 49453.2 |
| prka aaa domain protein | HMPREF3040_05149 | Not Available | Negative | 4827569 - 4829503 | 74484.3 |
| mlta-interacting protein | HMPREF3040_05150 | Not Available | Positive | 4829939 - 4830685 | 27832.4 |
| oxidoreductase, aldo/keto reductase family protein | HMPREF3040_05151 | Not Available | Positive | 4830775 - 4831629 | 30962.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





