Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease l-psp | HMPREF3040_05121 | Not Available | Negative | 4802476 - 4802868 | 14464.3 |
| atp-dependent helicase | HMPREF3040_05122 | Not Available | Positive | 4802952 - 4804862 | 70409.9 |
| universal bacterial protein yeaz | HMPREF3040_05123 | Not Available | Positive | 4804920 - 4805615 | 25182.3 |
| outer membrane lipoprotein, slp family | HMPREF3040_05124 | Not Available | Positive | 4805654 - 4806235 | 20922.4 |
| ribonuclease d | HMPREF3040_05126 | Not Available | Positive | 4808207 - 4809322 | 42214.0 |
| 2fe-2s iron-sulfur cluster binding domain protein | HMPREF3040_05127 | Not Available | Negative | 4809376 - 4810341 | 35676.1 |
| rieske | HMPREF3040_05128 | Not Available | Negative | 4810397 - 4811521 | 42535.9 |
| transporter, betaine/carnitine/choline family | HMPREF3040_05129 | Not Available | Negative | 4811553 - 4812701 | 41836.9 |
| hypothetical protein | HMPREF3040_05130 | Not Available | Negative | 4812849 - 4813163 | 11170.0 |
| tartrate dehydrogenase | HMPREF3040_05131 | Not Available | Negative | 4813414 - 4814499 | 40345.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





