Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose permease iic component | HMPREF3040_05111 | Not Available | Negative | 4792305 - 4793105 | 27637.6 |
| pts system mannose-specific eiiab component | HMPREF3040_05112 | Not Available | Negative | 4793168 - 4794139 | 35049.6 |
| transporter associated domain protein | HMPREF3040_05113 | Not Available | Positive | 4794602 - 4796158 | 56531.5 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3040_05114 | Not Available | Negative | 4796162 - 4797760 | 59680.0 |
| hypothetical protein | HMPREF3040_05115 | Not Available | Negative | 4797735 - 4797863 | 4524.52 |
| l-serine ammonia-lyase | HMPREF3040_05116 | Not Available | Negative | 4797891 - 4799189 | 46633.7 |
| hydrolase, nudix family | HMPREF3040_05117 | Not Available | Negative | 4799439 - 4800017 | 21464.9 |
| aminodeoxychorismate synthase, component i | HMPREF3040_05118 | Not Available | Negative | 4800021 - 4801382 | 51045.4 |
| hypothetical protein | HMPREF3040_05119 | Not Available | Positive | 4801456 - 4801635 | 6554.7 |
| hypothetical protein | HMPREF3040_05120 | Not Available | Negative | 4801755 - 4802114 | 13244.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





