Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis methyltransferase | HMPREF3040_00241 | Not Available | Negative | 228310 - 229065 | 28074.8 |
| dna recombination protein rmuc | HMPREF3040_00242 | Not Available | Negative | 229160 - 230572 | 54173.9 |
| uridine phosphorylase | HMPREF3040_00243 | Not Available | Negative | 230728 - 231489 | 27151.7 |
| carboxymethylenebutenolidase | HMPREF3040_00244 | Not Available | Positive | 231697 - 232566 | 31560.4 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | HMPREF3040_00245 | Not Available | Negative | 232605 - 234866 | 84712.1 |
| hth-type transcriptional regulator metr | HMPREF3040_00246 | Not Available | Positive | 235102 - 236055 | 35659.1 |
| hypothetical protein | HMPREF3040_00247 | Not Available | Positive | 236069 - 236836 | 28922.3 |
| cof-like hydrolase | HMPREF3040_00248 | Not Available | Negative | 236918 - 237718 | 29723.5 |
| hydrolase, alpha/beta domain protein | HMPREF3040_00249 | Not Available | Negative | 237726 - 238748 | 38964.4 |
| homoserine/homoserine lactone efflux protein | HMPREF3040_00250 | Not Available | Positive | 238859 - 239479 | 22428.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





