Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | HMPREF3040_05069 | Not Available | Negative | 4755335 - 4756777 | 51360.3 |
| transcriptional regulator, rpir family | HMPREF3040_05070 | Not Available | Negative | 4756905 - 4757774 | 31959.3 |
| hypothetical protein | HMPREF3040_05071 | Not Available | Positive | 4757797 - 4757946 | 5714.39 |
| glucose-6-phosphate dehydrogenase | HMPREF3040_05072 | Not Available | Positive | 4758112 - 4759587 | 55707.5 |
| phosphogluconate dehydratase | HMPREF3040_05073 | Not Available | Positive | 4759822 - 4761633 | 64642.9 |
| khg/kdpg aldolase | HMPREF3040_05074 | Not Available | Positive | 4761670 - 4762311 | 22285.3 |
| phosphoribosylglycinamide formyltransferase 2 | HMPREF3040_05075 | Not Available | Negative | 4762366 - 4763544 | 42544.3 |
| yebg protein | HMPREF3040_05076 | Not Available | Positive | 4763678 - 4763968 | 10717.5 |
| yebf family protein | HMPREF3040_05077 | Not Available | Positive | 4764023 - 4764391 | 13407.0 |
| hypothetical protein | HMPREF3040_05078 | Not Available | Positive | 4764718 - 4765377 | 23788.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





