Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fertility inhibition protein | HMPREF3040_05048 | Not Available | Positive | 4743815 - 4744372 | 21266.9 |
| hypothetical protein | HMPREF3040_05049 | Not Available | Positive | 4744386 - 4744520 | 4867.77 |
| hypothetical protein | HMPREF3040_05050 | Not Available | Positive | 4744524 - 4744727 | 7687.17 |
| hypothetical protein | HMPREF3040_05051 | Not Available | Positive | 4744916 - 4745059 | 5333.64 |
| nuclease-like protein | HMPREF3040_05052 | Not Available | Positive | 4745469 - 4745930 | 17622.4 |
| hypothetical protein | HMPREF3040_05053 | Not Available | Positive | 4746033 - 4746245 | 8162.38 |
| hypothetical protein | HMPREF3040_05054 | Not Available | Positive | 4746199 - 4746417 | 8285.31 |
| hypothetical protein | HMPREF3040_05055 | Not Available | Negative | 4746401 - 4746535 | 5099.27 |
| hypothetical protein | HMPREF3040_05056 | Not Available | Positive | 4746570 - 4747007 | 16375.3 |
| hypothetical protein | HMPREF3040_05057 | Not Available | Negative | 4746948 - 4747151 | 7473.99 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





