Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | HMPREF3040_05028 | Not Available | Positive | 4728486 - 4730684 | 81133.4 |
| hypothetical protein | HMPREF3040_05029 | Not Available | Negative | 4730670 - 4730867 | 7382.87 |
| hypothetical protein | HMPREF3040_05030 | Not Available | Negative | 4731235 - 4731363 | 4823.95 |
| serine protease sat autotransporter | HMPREF3040_05031 | Not Available | Positive | 4731628 - 4735515 | 140050.0 |
| hypothetical protein | HMPREF3040_05032 | Not Available | Positive | 4735562 - 4736143 | 22233.2 |
| transposase | HMPREF3040_05033 | Not Available | Positive | 4736458 - 4736892 | 16147.5 |
| element, orf2 protein, is66 family | HMPREF3040_05034 | Not Available | Positive | 4736943 - 4737239 | 11315.8 |
| hypothetical protein | HMPREF3040_05035 | Not Available | Positive | 4737330 - 4737841 | 19552.4 |
| is66 family element, transposase | HMPREF3040_05036 | Not Available | Positive | 4737842 - 4738762 | 34609.4 |
| transposase, is116/is110/is902 family | HMPREF3040_05037 | Not Available | Negative | 4738872 - 4740005 | 42605.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





