Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminic acid porin nanc | HMPREF3040_05018 | Not Available | Positive | 4716544 - 4717284 | 28989.1 |
| putative n-acetylneuraminate mutarotase | HMPREF3040_05019 | Not Available | Positive | 4717297 - 4718406 | 40645.4 |
| hypothetical protein | HMPREF3040_05020 | Not Available | Positive | 4718456 - 4719391 | 34781.7 |
| transcriptional repressor nanr | HMPREF3040_05021 | Not Available | Negative | 4719427 - 4720161 | 28204.0 |
| hypothetical protein | HMPREF3040_05022 | Not Available | Positive | 4720258 - 4721247 | 37541.1 |
| transporter, major facilitator family protein | HMPREF3040_05023 | Not Available | Negative | 4721406 - 4722599 | 41303.3 |
| aerobactin siderophore biosynthesis protein iuca | HMPREF3040_05024 | Not Available | Positive | 4722678 - 4724459 | 67108.4 |
| putative aerobactin siderophore biosynthesis protein iucb | HMPREF3040_05025 | Not Available | Positive | 4724460 - 4725407 | 37181.2 |
| siderophore biosynthesis protein, iuca/iucc family | HMPREF3040_05026 | Not Available | Positive | 4725407 - 4727149 | 66695.4 |
| l-lysine 6-monooxygenase | HMPREF3040_05027 | Not Available | Positive | 4727146 - 4728483 | 50899.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





