Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04978 | Not Available | Negative | 4687580 - 4688233 | 25121.8 |
| site-specific recombinase, phage integrase family | HMPREF3040_04979 | Not Available | Negative | 4688245 - 4689369 | 43053.3 |
| hypothetical protein | HMPREF3040_04980 | Not Available | Positive | 4689418 - 4689726 | 11568.3 |
| hypothetical protein | HMPREF3040_04981 | Not Available | Negative | 4689705 - 4690049 | 12469.4 |
| hypothetical protein | HMPREF3040_04982 | Not Available | Negative | 4690223 - 4690351 | 4785.98 |
| hypothetical protein | HMPREF3040_04983 | Not Available | Negative | 4690382 - 4690525 | 5191.32 |
| hypothetical protein | HMPREF3040_04984 | Not Available | Positive | 4690583 - 4690678 | 3154.73 |
| protein psia | HMPREF3040_04985 | Not Available | Positive | 4690675 - 4691394 | 27645.8 |
| sok family protein | HMPREF3040_04986 | Not Available | Negative | 4691415 - 4691594 | 6701.05 |
| hypothetical protein | HMPREF3040_04987 | Not Available | Positive | 4691659 - 4692512 | 31139.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





