Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fada | HMPREF3040_00231 | Not Available | Positive | 219338 - 220501 | 40844.6 |
| fmn reductase | HMPREF3040_00232 | Not Available | Negative | 220692 - 221393 | 26227.4 |
| ubid family decarboxylase | HMPREF3040_00233 | Not Available | Negative | 221439 - 222932 | 55590.8 |
| transcriptional activator rfah | HMPREF3040_00234 | Not Available | Positive | 223099 - 223587 | 18341.3 |
| hydrolase, tatd family | HMPREF3040_00235 | Not Available | Negative | 223584 - 224378 | 29566.2 |
| twin arginine-targeting protein translocase tatc | HMPREF3040_00236 | Not Available | Negative | 224408 - 225184 | 28877.0 |
| twin arginine-targeting protein translocase tatb | HMPREF3040_00237 | Not Available | Negative | 225187 - 225702 | 18421.8 |
| twin arginine-targeting protein translocase, tata/e family | HMPREF3040_00238 | Not Available | Negative | 225706 - 225975 | 9664.5 |
| 2-polyprenylphenol 6-hydroxylase | HMPREF3040_00239 | Not Available | Negative | 226054 - 227694 | 63190.3 |
| scp-2 sterol transfer family protein | HMPREF3040_00240 | Not Available | Negative | 227691 - 228296 | 22123.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





