Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04938 | Not Available | Negative | 4652290 - 4653099 | 31963.9 |
| hypothetical protein | HMPREF3040_04939 | Not Available | Positive | 4653147 - 4653782 | 23024.4 |
| hypothetical protein | HMPREF3040_04941 | Not Available | Negative | 4653800 - 4653955 | 5327.68 |
| hypothetical protein | HMPREF3040_04940 | Not Available | Positive | 4653954 - 4654241 | 10060.2 |
| hypothetical protein | HMPREF3040_04942 | Not Available | Positive | 4654244 - 4655479 | 45622.1 |
| pilin inner membrane protein pilm | HMPREF3040_04943 | Not Available | Positive | 4655485 - 4655922 | 16451.9 |
| hypothetical protein | HMPREF3040_04944 | Not Available | Positive | 4656041 - 4656439 | 15351.5 |
| transglycosylase slt domain protein | HMPREF3040_04945 | Not Available | Positive | 4656460 - 4657044 | 21506.2 |
| hypothetical protein | HMPREF3040_04946 | Not Available | Positive | 4657044 - 4657334 | 10496.0 |
| type iv secretory pathway, virb3-like protein | HMPREF3040_04947 | Not Available | Positive | 4657405 - 4657725 | 11912.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





