Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hok/gef family protein | HMPREF3040_04918 | Not Available | Negative | 4642688 - 4642849 | 6092.56 |
| hypothetical protein | HMPREF3040_04919 | Not Available | Negative | 4643070 - 4643231 | 6136.54 |
| hypothetical protein | HMPREF3040_04920 | Not Available | Negative | 4643324 - 4643554 | 8239.03 |
| hypothetical protein | HMPREF3040_04921 | Not Available | Positive | 4643863 - 4644042 | 6519.01 |
| hypothetical protein | HMPREF3040_04922 | Not Available | Positive | 4644006 - 4644182 | 6845.4 |
| replication initiation protein | HMPREF3040_04923 | Not Available | Negative | 4644280 - 4645308 | 39952.3 |
| hypothetical protein | HMPREF3040_04924 | Not Available | Positive | 4645492 - 4645680 | 6965.45 |
| hypothetical protein | HMPREF3040_04925 | Not Available | Positive | 4645901 - 4646197 | 11003.2 |
| hypothetical protein | HMPREF3040_04926 | Not Available | Positive | 4646392 - 4646898 | 19517.6 |
| hypothetical protein | HMPREF3040_04927 | Not Available | Positive | 4646891 - 4647085 | 7329.78 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





