Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | HMPREF3040_04898 | Not Available | Negative | 4629090 - 4630142 | 40088.9 |
| ethanolamine utilization protein eutk | HMPREF3040_04899 | Not Available | Negative | 4630188 - 4630688 | 17865.7 |
| ethanolamine utilization protein eutl | HMPREF3040_04900 | Not Available | Negative | 4630701 - 4631321 | 21451.4 |
| ethanolamine ammonia-lyase, light subunit | HMPREF3040_04901 | Not Available | Negative | 4631370 - 4632257 | 31770.4 |
| ethanolamine ammonia-lyase, large subunit | HMPREF3040_04902 | Not Available | Negative | 4632278 - 4633639 | 49405.9 |
| ethanolamine utilization protein euta | HMPREF3040_04903 | Not Available | Negative | 4633651 - 4635054 | 49477.9 |
| ethanolamine utilization protein, euth | HMPREF3040_04904 | Not Available | Negative | 4635051 - 4636277 | 42795.6 |
| hypothetical protein | HMPREF3040_04905 | Not Available | Positive | 4636340 - 4636894 | 21080.8 |
| hypothetical protein | HMPREF3040_04906 | Not Available | Positive | 4636947 - 4637267 | 11917.2 |
| toxin-antitoxin system, antitoxin component, hicb family | HMPREF3040_04907 | Not Available | Negative | 4637398 - 4637835 | 16115.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





