Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | HMPREF3040_04888 | Not Available | Negative | 4619897 - 4620754 | 31282.8 |
| n-acetylmuramic acid 6-phosphate etherase | HMPREF3040_04889 | Not Available | Positive | 4620918 - 4621814 | 31072.7 |
| n-acetylmuramic acid phosphotransfer permease | HMPREF3040_04890 | Not Available | Positive | 4621818 - 4623242 | 49785.0 |
| beta-lactamase | HMPREF3040_04891 | Not Available | Positive | 4623247 - 4624548 | 47485.7 |
| dyp-type peroxidase family protein | HMPREF3040_04892 | Not Available | Negative | 4624606 - 4625505 | 33063.1 |
| hypothetical protein | HMPREF3040_04893 | Not Available | Negative | 4625601 - 4626146 | 19738.2 |
| hypothetical protein | HMPREF3040_04894 | Not Available | Negative | 4626237 - 4626686 | 17129.3 |
| acetyltransferase, gnat family | HMPREF3040_04895 | Not Available | Negative | 4626673 - 4627098 | 16326.6 |
| n-acetylmuramoyl-l-alanine amidase | HMPREF3040_04896 | Not Available | Positive | 4627312 - 4628181 | 31425.9 |
| coproporphyrinogen iii oxidase | HMPREF3040_04897 | Not Available | Positive | 4628185 - 4629084 | 34343.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





