Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase | HMPREF3040_04878 | Not Available | Positive | 4610304 - 4612031 | 63537.5 |
| glucose-specific phosphotransferase enzyme iia component | HMPREF3040_04879 | Not Available | Positive | 4612072 - 4612581 | 18252.1 |
| pyridoxal kinase | HMPREF3040_04880 | Not Available | Negative | 4612623 - 4613474 | 30876.2 |
| hypothetical protein | HMPREF3040_04881 | Not Available | Positive | 4613579 - 4613947 | 13530.5 |
| cysteine synthase b | HMPREF3040_04882 | Not Available | Negative | 4613950 - 4614939 | 35863.2 |
| sulfate abc transporter, atp-binding protein | HMPREF3040_04883 | Not Available | Negative | 4614995 - 4616092 | 41061.4 |
| sulfate abc transporter, permease protein cysw | HMPREF3040_04884 | Not Available | Negative | 4616082 - 4616957 | 32511.6 |
| sulfate abc transporter, permease protein cyst | HMPREF3040_04885 | Not Available | Negative | 4616957 - 4617790 | 30293.6 |
| thiosulfate transport protein, cysp abc superfamily | HMPREF3040_04886 | Not Available | Negative | 4617790 - 4618806 | 37644.6 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3040_04887 | Not Available | Negative | 4618977 - 4619834 | 30625.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





