Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00221 | Not Available | Negative | 209851 - 210060 | 7643.2 |
| anta/antb antirepressor | HMPREF3040_00222 | Not Available | Negative | 210175 - 210831 | 24721.8 |
| hypothetical protein | HMPREF3040_00223 | Not Available | Positive | 211231 - 211959 | 27375.7 |
| hypothetical protein | HMPREF3040_00224 | Not Available | Negative | 211982 - 212362 | 14549.5 |
| hypothetical protein | HMPREF3040_00225 | Not Available | Positive | 212435 - 212878 | 16470.5 |
| protoporphyrinogen oxidase | HMPREF3040_00226 | Not Available | Negative | 212957 - 213502 | 21200.4 |
| potassium uptake protein, trkh family | HMPREF3040_00227 | Not Available | Negative | 213514 - 214965 | 52944.8 |
| yigz family protein | HMPREF3040_00228 | Not Available | Negative | 215004 - 215618 | 21708.1 |
| xaa-pro dipeptidase | HMPREF3040_00229 | Not Available | Negative | 215618 - 216949 | 50178.9 |
| fatty oxidation complex, alpha subunit fadb | HMPREF3040_00230 | Not Available | Positive | 217013 - 219328 | 84675.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





