Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04868 | Not Available | Positive | 4601824 - 4602165 | 12489.7 |
| lysr substrate binding domain protein | HMPREF3040_04869 | Not Available | Negative | 4602156 - 4603082 | 33874.1 |
| sodium bile acid symporter family protein | HMPREF3040_04870 | Not Available | Positive | 4603172 - 4604170 | 36426.9 |
| hypothetical protein | HMPREF3040_04871 | Not Available | Negative | 4604167 - 4604385 | 8443.63 |
| dna ligase | HMPREF3040_04872 | Not Available | Negative | 4604387 - 4606402 | 73639.3 |
| cell division protein zipa | HMPREF3040_04873 | Not Available | Negative | 4606473 - 4607471 | 36937.9 |
| putative sulfate transport protein cysz | HMPREF3040_04874 | Not Available | Positive | 4607701 - 4608462 | 29306.6 |
| cysteine synthase a | HMPREF3040_04875 | Not Available | Positive | 4608647 - 4609618 | 34491.7 |
| hypothetical protein | HMPREF3040_04876 | Not Available | Positive | 4609635 - 4609787 | 5932.43 |
| phosphocarrier protein hpr | HMPREF3040_04877 | Not Available | Positive | 4610002 - 4610259 | 9119.89 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





