Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m42 glutamyl aminopeptidase | HMPREF3040_04849 | Not Available | Negative | 4586236 - 4587273 | 37429.1 |
| creatinase | HMPREF3040_04850 | Not Available | Negative | 4587273 - 4588358 | 39582.2 |
| phosphotransferase system, eiic | HMPREF3040_04851 | Not Available | Negative | 4588373 - 4589620 | 43941.0 |
| putative fructose-like phosphotransferase enzyme iib component 2 | HMPREF3040_04852 | Not Available | Negative | 4589642 - 4589968 | 11736.0 |
| glucokinase | HMPREF3040_04853 | Not Available | Negative | 4590188 - 4591153 | 34725.1 |
| chloride transporter, clc family | HMPREF3040_04854 | Not Available | Positive | 4591381 - 4592613 | 42709.4 |
| hypothetical protein | HMPREF3040_04855 | Not Available | Positive | 4592728 - 4593054 | 13293.4 |
| manganese transport protein mnth | HMPREF3040_04856 | Not Available | Negative | 4593196 - 4594434 | 44196.5 |
| nucleoside permease nupc | HMPREF3040_04857 | Not Available | Positive | 4594770 - 4595972 | 43478.4 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3040_04858 | Not Available | Negative | 4596022 - 4598211 | 83621.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





