Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial pre-peptidase domain protein | HMPREF3040_04788 | Not Available | Negative | 4528117 - 4528518 | 14807.5 |
| hypothetical protein | HMPREF3040_04789 | Not Available | Positive | 4528589 - 4528747 | 5582.75 |
| ycgl domain protein | HMPREF3040_04790 | Not Available | Positive | 4528726 - 4529052 | 12437.3 |
| fah family protein | HMPREF3040_04791 | Not Available | Positive | 4529124 - 4529783 | 23682.4 |
| hypothetical protein | HMPREF3040_04792 | Not Available | Positive | 4529860 - 4530321 | 17911.3 |
| hemolysin e | HMPREF3040_04793 | Not Available | Negative | 4530528 - 4531445 | 33977.6 |
| peptidase s24-like protein | HMPREF3040_04795 | Not Available | Positive | 4531811 - 4532230 | 15064.2 |
| dna polymerase v subunit umuc | HMPREF3040_04796 | Not Available | Positive | 4532230 - 4533498 | 47636.3 |
| disulfide bond formation protein b | HMPREF3040_04797 | Not Available | Negative | 4533544 - 4534080 | 20387.7 |
| na+/h+ antiporter nhab | HMPREF3040_04798 | Not Available | Negative | 4534220 - 4535791 | 57919.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





