Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04778 | Not Available | Negative | 4523460 - 4523795 | 12114.9 |
| hypothetical protein | HMPREF3040_04779 | Not Available | Negative | 4523799 - 4524083 | 8685.77 |
| hypothetical protein | HMPREF3040_04780 | Not Available | Negative | 4524145 - 4524318 | 6539.22 |
| hypothetical protein | HMPREF3040_04781 | Not Available | Positive | 4524565 - 4524684 | 4203.12 |
| hypothetical protein | HMPREF3040_04782 | Not Available | Positive | 4524751 - 4524960 | 7372.41 |
| cell division topological specificity factor mine | HMPREF3040_04783 | Not Available | Negative | 4525325 - 4525591 | 10235.5 |
| septum site-determining protein mind | HMPREF3040_04784 | Not Available | Negative | 4525595 - 4526407 | 29615.8 |
| septum site-determining protein minc | HMPREF3040_04785 | Not Available | Negative | 4526431 - 4527126 | 24746.9 |
| hypothetical protein | HMPREF3040_04786 | Not Available | Positive | 4527266 - 4527493 | 8599.82 |
| fels-1 prophage protein-like protein | HMPREF3040_04787 | Not Available | Positive | 4527646 - 4528014 | 13390.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





