Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04768 | Not Available | Positive | 4516926 - 4517162 | 8720.46 |
| hypothetical protein | HMPREF3040_04769 | Not Available | Positive | 4517205 - 4517477 | 10370.5 |
| regulatory protein arir | HMPREF3040_04770 | Not Available | Positive | 4517506 - 4517772 | 9710.59 |
| hypothetical protein | HMPREF3040_04771 | Not Available | Positive | 4517885 - 4518133 | 9667.78 |
| hypothetical protein | HMPREF3040_04772 | Not Available | Negative | 4518336 - 4518605 | 10051.6 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3040_04773 | Not Available | Positive | 4518904 - 4519992 | 40857.5 |
| hypothetical protein | HMPREF3040_04774 | Not Available | Positive | 4520124 - 4520342 | 8242.35 |
| hypothetical protein | HMPREF3040_04775 | Not Available | Positive | 4520459 - 4520578 | 4680.9 |
| hypothetical protein | HMPREF3040_04776 | Not Available | Positive | 4520742 - 4521725 | 35122.9 |
| outer membrane autotransporter barrel domain protein | HMPREF3040_04777 | Not Available | Positive | 4521755 - 4523404 | 59706.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





