Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | HMPREF3040_04718 | Not Available | Positive | 4467787 - 4468875 | 39127.8 |
| hypothetical protein | HMPREF3040_04719 | Not Available | Negative | 4468885 - 4469082 | 7467.89 |
| carbon starvation protein a | HMPREF3040_04720 | Not Available | Negative | 4469236 - 4471341 | 75107.7 |
| hypothetical protein | HMPREF3040_04721 | Not Available | Negative | 4471522 - 4471935 | 14984.0 |
| 2,3-dihydroxybenzoate-2,3-dehydrogenase | HMPREF3040_04722 | Not Available | Negative | 4471938 - 4472684 | 26249.2 |
| isochorismatase | HMPREF3040_04723 | Not Available | Negative | 4472684 - 4473541 | 32487.9 |
| (2,3-dihydroxybenzoyl)adenylate synthase | HMPREF3040_04724 | Not Available | Negative | 4473555 - 4475165 | 59113.3 |
| isochorismate synthase | HMPREF3040_04725 | Not Available | Negative | 4475175 - 4476362 | 43493.5 |
| ferrienterobactin-binding periplasmic protein | HMPREF3040_04726 | Not Available | Positive | 4476539 - 4477495 | 34343.1 |
| protein p43 | HMPREF3040_04727 | Not Available | Negative | 4477499 - 4478749 | 43303.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





