Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00201 | Not Available | Positive | 188636 - 188998 | 13769.1 |
| hypothetical protein | HMPREF3040_00202 | Not Available | Positive | 188995 - 189492 | 19158.9 |
| multidrug resistance protein d | HMPREF3040_00203 | Not Available | Negative | 189500 - 190684 | 42227.5 |
| toxic peptide tisb | HMPREF3040_00204 | Not Available | Negative | 190964 - 191053 | 3195.29 |
| hypothetical protein | HMPREF3040_00206 | Not Available | Negative | 191341 - 191823 | 17486.2 |
| acetolactate synthase, large subunit | HMPREF3040_00205 | Not Available | Positive | 191822 - 193510 | 60396.2 |
| acetohydroxy-acid synthase i small subunit | HMPREF3040_00207 | Not Available | Positive | 193514 - 193804 | 11106.4 |
| hypothetical protein | HMPREF3040_00208 | Not Available | Positive | 194069 - 195364 | 48116.4 |
| hypothetical protein | HMPREF3040_00209 | Not Available | Positive | 195640 - 197109 | 55081.2 |
| dna-binding response regulator in two-component regulatory system wtih uhpb | HMPREF3040_00210 | Not Available | Positive | 197211 - 197861 | 23194.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





