Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-aspartate periplasmic-binding protein | HMPREF3040_04657 | Not Available | Positive | 4414848 - 4415831 | 36238.4 |
| putative atp synthase f0, a subunit | HMPREF3040_04659 | Not Available | Positive | 4416001 - 4416741 | 27504.3 |
| glutamate/aspartate transport system permease protein gltk | HMPREF3040_04660 | Not Available | Positive | 4416741 - 4417415 | 24917.2 |
| glutamate abc transporter, atp-binding protein glua | HMPREF3040_04661 | Not Available | Positive | 4417415 - 4418140 | 26662.7 |
| cytidine/uridine-specific hydrolase | HMPREF3040_04662 | Not Available | Positive | 4418258 - 4419193 | 33824.9 |
| chaperone protein hscc | HMPREF3040_04663 | Not Available | Positive | 4419277 - 4420947 | 61892.8 |
| dnaj domain protein | HMPREF3040_04664 | Not Available | Negative | 4421007 - 4422458 | 55631.0 |
| hypothetical protein | HMPREF3040_04665 | Not Available | Negative | 4422455 - 4423162 | 26961.7 |
| sel1 repeat protein | HMPREF3040_04666 | Not Available | Positive | 4423264 - 4423818 | 21013.1 |
| dnaj domain protein | HMPREF3040_04667 | Not Available | Negative | 4423828 - 4425255 | 55260.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





