Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k+-transporting atpase, a subunit | HMPREF3040_04617 | Not Available | Positive | 4380094 - 4381767 | 59085.6 |
| k+-transporting atpase, b subunit | HMPREF3040_04618 | Not Available | Positive | 4381790 - 4383838 | 72255.6 |
| k+-transporting atpase, c subunit | HMPREF3040_04619 | Not Available | Positive | 4383847 - 4384419 | 20366.4 |
| histidine kinase kdpd | HMPREF3040_04620 | Not Available | Positive | 4384412 - 4387096 | 98697.1 |
| kdp operon transcriptional regulatory protein kdpe | HMPREF3040_04621 | Not Available | Positive | 4387093 - 4387770 | 25491.9 |
| hypothetical protein | HMPREF3040_04622 | Not Available | Negative | 4387882 - 4388427 | 20487.6 |
| phosphoglucomutase, alpha-d-glucose phosphate-specific | HMPREF3040_04623 | Not Available | Negative | 4388581 - 4390221 | 58382.2 |
| seqa protein | HMPREF3040_04624 | Not Available | Negative | 4390247 - 4390792 | 20316.6 |
| hydrolase, alpha/beta domain protein | HMPREF3040_04625 | Not Available | Positive | 4390977 - 4391741 | 28439.0 |
| ribbon-helix-helix protein, copg family | HMPREF3040_04626 | Not Available | Positive | 4391812 - 4392174 | 13873.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





