Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00370 family protein | HMPREF3040_04607 | Not Available | Negative | 4372616 - 4373230 | 22387.1 |
| dinuclear metal center protein, ybgi family | HMPREF3040_04608 | Not Available | Negative | 4373295 - 4374038 | 26894.0 |
| amino acid/peptide transporter | HMPREF3040_04609 | Not Available | Positive | 4374309 - 4375790 | 54164.1 |
| deoxyribodipyrimidine photo-lyase | HMPREF3040_04610 | Not Available | Negative | 4375832 - 4377250 | 53897.3 |
| hypothetical protein | HMPREF3040_04611 | Not Available | Negative | 4377247 - 4377756 | 20298.5 |
| hypothetical protein | HMPREF3040_04612 | Not Available | Negative | 4377841 - 4378248 | 15640.2 |
| hypothetical protein | HMPREF3040_04613 | Not Available | Negative | 4378261 - 4378545 | 10767.0 |
| hypothetical protein | HMPREF3040_04614 | Not Available | Negative | 4378628 - 4378981 | 13787.2 |
| hypothetical protein | HMPREF3040_04615 | Not Available | Negative | 4379486 - 4379692 | 8303.06 |
| k+-transporting atpase, f subunit | HMPREF3040_04616 | Not Available | Positive | 4379891 - 4380094 | 7423.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





